PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G212000.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 318aa    MW: 35442.8 Da    PI: 4.5795
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G212000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87.3e-12135177855
                        HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         ErrRR+r+++++  Lr+l+P+      +K++Ka+i+  Av Y+++Lq
  Aqcoe2G212000.1.p 135 SERRRRSRMKEKLYALRSLVPNI-----TKMDKASIVGDAVSYVQELQ 177
                        6*********************7.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-16127192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.796127176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-17129194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.26E-12129179No hitNo description
SMARTSM003534.1E-14133182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-9135177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MQNQGFENSV VQEVNDFAVH DFINDSNFDQ FIDLIRGENA IPITNYVPNY DADELMFGGE  60
IIDSQFFPHA LENVFNCSSI SPPEHNLFLH SLPAFSGGDI DIGDGDNDND EDDSSANTTT  120
PTKGARGDRS RTLVSERRRR SRMKEKLYAL RSLVPNITKM DKASIVGDAV SYVQELQMQA  180
KKIKAEIAVL EESLTGAGKI QGLLENEKKP NTIATNQMRN SICRKILQMD VFQMEDKEYY  240
VRLVSNKGEG MATSLYKALE SLSSFDVKNS NFSTVSERCV LACTVNVKEC GEDMNLSTLK  300
LWVTGALLNQ GFEIRTF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010243207.11e-105PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like isoform X1
SwissprotQ0V7X46e-88FIT_ARATH; Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
TrEMBLD7SNA51e-97D7SNA5_VITVI; Putative uncharacterized protein
STRINGVIT_06s0061g00720.t013e-97(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.15e-71FER-like regulator of iron uptake